User guide

Here you can find information on how to use Pharmpy in Python and R as well as from the command line. This guide covers basic use cases in Pharmpy. More detailed information can be found in the API reference.

• Tools
  • Tools in Pharmpy
  • Common options
• Model estimation and results
  • Fitting a model
  • Modelfit results
• Modeling
  • Basic functions
  • Create basic models
  • Modeling transformations
  • Examining and modifying dataset
• The Pharmpy model
  • Reading in a model
  • Writing a model
  • Inspecting the model attributes
  • Low level manipulations of the model object
• Dataset
  • Retrieving the dataset from a model
  • Update the dataset of a model
  • DataInfo
• Configuration
  • The configuration file
  • Available configurations
  • Environment variables
• Pharmpy in R
  • Installing pharmr
  • Using pharmr
  • Gotchas
• Command line interface
  • pharmpy
• PsN with Pharmpy
  • Tools connected to PsN