Welcome to Pharmpy

Pharmpy is a library and a set of tools for pharmacometrics. It can be used as a regular Python package, in R using the pharmr package or via its built-in command line interface. Current features include:

• General model abstraction for pharmacometric models

• Manipulation of models

• Extraction of model estimation results

• Manipulation of datasets

• Various calculations and evaluations

• Plugin system to support different model formats (NONMEM, nlmixr2, rxode2)

• Running models (NONMEM, nlmixr2, rxode2)

• Running higher level workflows or tools (NONMEM)

• Parsing and updating NONMEM models

• Model conversion to NONMEM, nlmixr2, and rxode2

We encourage your contribution to the Pharmpy project! You can report issues and post suggestions of features via GitHub issues (to Pharmpy or to pharmr). If you want to contribute with code you can find more information under Contribute.

Pharmpy is maintained by the Uppsala University Pharmacometrics group and is an open-source project.