pharmpy.tools.scm.results module

class pharmpy.tools.scm.results.SCMResults(steps=None)

Bases: pharmpy.results.Results

SCM Results class

candidate_summary()

ofv_summary(final_included=True, iterations=True)

rst_path = PosixPath('/home/runner/work/pharmpy/pharmpy/pharmpy/.tox/docs/lib/python3.9/site-packages/pharmpy/tools/scm/report.rst')

pharmpy.tools.scm.results.add_covariate_effects(res, path)

pharmpy.tools.scm.results.candidate_summary_dataframe(steps)

pharmpy.tools.scm.results.empty_step(previous_number, previous_criterion=None)

pharmpy.tools.scm.results.extended_states(model_names, included_relations)

pharmpy.tools.scm.results.file_blocks(path)

pharmpy.tools.scm.results.have(something)

pharmpy.tools.scm.results.log_steps(path, options, parcov_dictionary=None)

pharmpy.tools.scm.results.model_name_series_to_dataframe(modelname, parcov_dictionary, is_backward, included_relations)

pharmpy.tools.scm.results.names_without_state(model_names)

pharmpy.tools.scm.results.ofv_summary_dataframe(steps, final_included=True, iterations=True)

pharmpy.tools.scm.results.parcov_dict_from_test_relations(test_relations)

pharmpy.tools.scm.results.parse_chosen_relation_block(block)

pharmpy.tools.scm.results.parse_mixed_block(block)

pharmpy.tools.scm.results.parse_runtable_block(block, parcov_dictionary=None, included_relations=None)

pharmpy.tools.scm.results.prior_included_step(included_relations, gof_is_pvalue)

pharmpy.tools.scm.results.psn_config_file_argument_from_command(command, path)

pharmpy.tools.scm.results.psn_scm_options(path)

pharmpy.tools.scm.results.psn_scm_parse_logfile(logfile, options, parcov_dictionary)

Read SCM results

pharmpy.tools.scm.results.psn_scm_results(path)

Create scm results from a PsN SCM run

Parameters

path – Path to PsN scm run directory

Returns

A SCMResults object

pharmpy.tools.scm.results.relations_from_config_file(path, files)

pharmpy.tools.scm.results.split_merged_base_and_new_ofv(rawtable)

pharmpy.tools.scm.results.step_data_frame(step, included_relations)

Inheritance Diagram

pharmpy.tools.scm package pharmpy.tools.simeval package