Source code for pharmpy.tools.modelsearch.rankfuncs

# All functions used for comparing a set of candidate models and
# ranking them take the same base arguments
# base - the base model
# candidates - a list of candidate models
# returns a list which is a subset of the candidates with the best ranked at the beginning
# models can be removed from candidates if they don't pass some criteria


[docs]def ofv(base, candidates, cutoff=3.84): base_ofv = base.modelfit_results.ofv filtered = [model for model in candidates if base_ofv - model.modelfit_results.ofv >= cutoff] srtd = sorted(filtered, key=lambda model: model.modelfit_results.ofv) return srtd
[docs]def aic(base, candidates, cutoff=3.84): base_aic = base.modelfit_results.aic filtered = [model for model in candidates if base_aic - model.modelfit_results.aic >= cutoff] srtd = sorted(filtered, key=lambda model: model.modelfit_results.aic) return srtd
[docs]def bic(base, candidates, cutoff=3.84): base_bic = base.modelfit_results.bic filtered = [model for model in candidates if base_bic - model.modelfit_results.bic >= cutoff] srtd = sorted(filtered, key=lambda model: model.modelfit_results.bic) return srtd